WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08C6.1c.1 Sequence Name  F08C6.1c.1
Length (nt)  4359   Chromosome Location  X: 7586209-7595245
Chromosome . Primary Identifier  X Chromosome Location . Start  7586209
Chromosome Location . End  7595245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08C6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08C6.1c F08C6.1c 2928   X: 7586209-7586247

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08C6.1c.1 7586209 7595245 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239981   39   X: 7586209-7586247 Caenorhabditis elegans
Exon239987   76   X: 7588662-7588737 Caenorhabditis elegans
Exon239989   74   X: 7588786-7588859 Caenorhabditis elegans
Exon239991   192   X: 7588905-7589096 Caenorhabditis elegans
Exon239993   255   X: 7589165-7589419 Caenorhabditis elegans
Exon239995   195   X: 7589464-7589658 Caenorhabditis elegans
Exon239997   119   X: 7589779-7589897 Caenorhabditis elegans
Exon239999   147   X: 7589954-7590100 Caenorhabditis elegans
Exon240001   129   X: 7590144-7590272 Caenorhabditis elegans
Exon240003   133   X: 7590481-7590613 Caenorhabditis elegans
Exon240006   100   X: 7591240-7591339 Caenorhabditis elegans
Exon240008   217   X: 7591521-7591737 Caenorhabditis elegans
Exon240010   112   X: 7591792-7591903 Caenorhabditis elegans
Exon240012   102   X: 7591950-7592051 Caenorhabditis elegans
Exon240014   284   X: 7592360-7592643 Caenorhabditis elegans
Exon240016   215   X: 7592693-7592907 Caenorhabditis elegans
Exon240018   137   X: 7593224-7593360 Caenorhabditis elegans
Exon240020   1833   X: 7593413-7595245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08C6.1c.1 7586209 7595245 1

1 Sequence

Length
4359

1 Sequence Ontology Term

Identifier Name Description
transcript