WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44E12.3d.1 Sequence Name  C44E12.3d.1
Length (nt)  2271   Chromosome Location  X: 7599806-7606419
Chromosome . Primary Identifier  X Chromosome Location . Start  7599806
Chromosome Location . End  7606419 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44E12.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006671 twk-17 C44E12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44E12.3d C44E12.3d 1689   X: 7600365-7600466

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3d.1 7599806 7606419 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240031   661   X: 7599806-7600466 Caenorhabditis elegans
Exon240045   121   X: 7600961-7601081 Caenorhabditis elegans
Exon240049   197   X: 7601127-7601323 Caenorhabditis elegans
Exon240056   91   X: 7601854-7601944 Caenorhabditis elegans
Exon240063   168   X: 7602471-7602638 Caenorhabditis elegans
Exon240070   102   X: 7602686-7602787 Caenorhabditis elegans
Exon240077   130   X: 7602852-7602981 Caenorhabditis elegans
Exon240084   256   X: 7603036-7603291 Caenorhabditis elegans
Exon240091   117   X: 7603350-7603466 Caenorhabditis elegans
Exon240098   110   X: 7603513-7603622 Caenorhabditis elegans
Exon240105   318   X: 7606102-7606419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3d.1 7599806 7606419 -1

1 Sequence

Length
2271

1 Sequence Ontology Term

Identifier Name Description
transcript