WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44E12.3f.1 Sequence Name  C44E12.3f.1
Length (nt)  2164   Chromosome Location  X: 7599816-7608082
Chromosome . Primary Identifier  X Chromosome Location . Start  7599816
Chromosome Location . End  7608082 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44E12.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006671 twk-17 C44E12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44E12.3f C44E12.3f 1539   X: 7600365-7600466

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3f.1 7599816 7608082 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240033   651   X: 7599816-7600466 Caenorhabditis elegans
Exon240038   27   X: 7600690-7600716 Caenorhabditis elegans
Exon240041   136   X: 7600946-7601081 Caenorhabditis elegans
Exon240051   197   X: 7601127-7601323 Caenorhabditis elegans
Exon240058   91   X: 7601854-7601944 Caenorhabditis elegans
Exon240065   168   X: 7602471-7602638 Caenorhabditis elegans
Exon240072   102   X: 7602686-7602787 Caenorhabditis elegans
Exon240079   130   X: 7602852-7602981 Caenorhabditis elegans
Exon240086   256   X: 7603036-7603291 Caenorhabditis elegans
Exon240093   117   X: 7603350-7603466 Caenorhabditis elegans
Exon240100   110   X: 7603513-7603622 Caenorhabditis elegans
Exon240110   179   X: 7607904-7608082 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3f.1 7599816 7608082 -1

1 Sequence

Length
2164

1 Sequence Ontology Term

Identifier Name Description
transcript