WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44E12.3e.1 Sequence Name  C44E12.3e.1
Length (nt)  1723   Chromosome Location  X: 7600825-7606396
Chromosome . Primary Identifier  X Chromosome Location . Start  7600825
Chromosome Location . End  7606396 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44E12.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006671 twk-17 C44E12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44E12.3e C44E12.3e 1635   X: 7600913-7601081

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3e.1 7600825 7606396 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240039   257   X: 7600825-7601081 Caenorhabditis elegans
Exon240050   197   X: 7601127-7601323 Caenorhabditis elegans
Exon240057   91   X: 7601854-7601944 Caenorhabditis elegans
Exon240064   168   X: 7602471-7602638 Caenorhabditis elegans
Exon240071   102   X: 7602686-7602787 Caenorhabditis elegans
Exon240078   130   X: 7602852-7602981 Caenorhabditis elegans
Exon240085   256   X: 7603036-7603291 Caenorhabditis elegans
Exon240092   117   X: 7603350-7603466 Caenorhabditis elegans
Exon240099   110   X: 7603513-7603622 Caenorhabditis elegans
Exon240104   295   X: 7606102-7606396 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3e.1 7600825 7606396 -1

1 Sequence

Length
1723

1 Sequence Ontology Term

Identifier Name Description
transcript