WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D9.2.1 Sequence Name  F27D9.2.1
Length (nt)  1675   Chromosome Location  X: 7672993-7676305
Chromosome . Primary Identifier  X Chromosome Location . Start  7672993
Chromosome Location . End  7676305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017861 mfsd-8.5 F27D9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D9.2 F27D9.2 1497   X: 7672995-7673087

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.2.1 7672993 7676305 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240197   95   X: 7672993-7673087 Caenorhabditis elegans
Exon240198   114   X: 7673140-7673253 Caenorhabditis elegans
Exon240199   244   X: 7673295-7673538 Caenorhabditis elegans
Exon240200   317   X: 7673592-7673908 Caenorhabditis elegans
Exon240201   92   X: 7675119-7675210 Caenorhabditis elegans
Exon240202   141   X: 7675258-7675398 Caenorhabditis elegans
Exon240203   110   X: 7675450-7675559 Caenorhabditis elegans
Exon240204   68   X: 7675608-7675675 Caenorhabditis elegans
Exon240205   102   X: 7675720-7675821 Caenorhabditis elegans
Exon240206   123   X: 7675868-7675990 Caenorhabditis elegans
Exon240207   269   X: 7676037-7676305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.2.1 7672993 7676305 1

1 Sequence

Length
1675

1 Sequence Ontology Term

Identifier Name Description
transcript