WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D9.8.1 Sequence Name  F27D9.8.1
Length (nt)  1684   Chromosome Location  X: 7676511-7680619
Chromosome . Primary Identifier  X Chromosome Location . Start  7676511
Chromosome Location . End  7680619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017866 stn-2 F27D9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D9.8 F27D9.8 1548   X: 7676552-7676677

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.8.1 7676511 7680619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240208   167   X: 7676511-7676677 Caenorhabditis elegans
Exon240209   120   X: 7676722-7676841 Caenorhabditis elegans
Exon240210   93   X: 7676890-7676982 Caenorhabditis elegans
Exon240211   165   X: 7677028-7677192 Caenorhabditis elegans
Exon240212   66   X: 7677238-7677303 Caenorhabditis elegans
Exon240213   126   X: 7677357-7677482 Caenorhabditis elegans
Exon240214   169   X: 7677906-7678074 Caenorhabditis elegans
Exon240215   149   X: 7678161-7678309 Caenorhabditis elegans
Exon240216   64   X: 7678364-7678427 Caenorhabditis elegans
Exon240217   97   X: 7678857-7678953 Caenorhabditis elegans
Exon240218   66   X: 7679475-7679540 Caenorhabditis elegans
Exon240219   64   X: 7679593-7679656 Caenorhabditis elegans
Exon240220   134   X: 7679702-7679835 Caenorhabditis elegans
Exon240221   73   X: 7680272-7680344 Caenorhabditis elegans
Exon240222   131   X: 7680489-7680619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.8.1 7676511 7680619 -1

1 Sequence

Length
1684

1 Sequence Ontology Term

Identifier Name Description
transcript