WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D9.1a.1 Sequence Name  F27D9.1a.1
Length (nt)  2613   Chromosome Location  X: 7682896-7686037
Chromosome . Primary Identifier  X Chromosome Location . Start  7682896
Chromosome Location . End  7686037 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006757 unc-18 F27D9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D9.1a F27D9.1a 1776   X: 7682932-7682959

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.1a.1 7682896 7686037 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240225   64   X: 7682896-7682959 Caenorhabditis elegans
Exon240227   129   X: 7683024-7683152 Caenorhabditis elegans
Exon240229   92   X: 7683204-7683295 Caenorhabditis elegans
Exon240231   174   X: 7683346-7683519 Caenorhabditis elegans
Exon240232   140   X: 7683566-7683705 Caenorhabditis elegans
Exon240234   265   X: 7683773-7684037 Caenorhabditis elegans
Exon240236   528   X: 7684107-7684634 Caenorhabditis elegans
Exon240238   176   X: 7684717-7684892 Caenorhabditis elegans
Exon240241   1045   X: 7684993-7686037 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.1a.1 7682896 7686037 1

1 Sequence

Length
2613

1 Sequence Ontology Term

Identifier Name Description
transcript