WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09F5.6b.1 Sequence Name  K09F5.6b.1
Length (nt)  3517   Chromosome Location  X: 7719272-7725637
Chromosome . Primary Identifier  X Chromosome Location . Start  7719272
Chromosome Location . End  7725637 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09F5.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044698 K09F5.6 K09F5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09F5.6b K09F5.6b 2760   X: 7719483-7719586

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09F5.6b.1 7719272 7725637 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240306   129   X: 7719272-7719400 Caenorhabditis elegans
Exon240309   111   X: 7719476-7719586 Caenorhabditis elegans
Exon240311   221   X: 7720127-7720347 Caenorhabditis elegans
Exon240313   141   X: 7720518-7720658 Caenorhabditis elegans
Exon240318   530   X: 7721563-7722092 Caenorhabditis elegans
Exon240320   360   X: 7722136-7722495 Caenorhabditis elegans
Exon240322   84   X: 7722543-7722626 Caenorhabditis elegans
Exon240324   234   X: 7722677-7722910 Caenorhabditis elegans
Exon240326   330   X: 7722976-7723305 Caenorhabditis elegans
Exon240328   200   X: 7723672-7723871 Caenorhabditis elegans
Exon240330   193   X: 7723926-7724118 Caenorhabditis elegans
Exon240331   383   X: 7724247-7724629 Caenorhabditis elegans
Exon240333   601   X: 7725037-7725637 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09F5.6b.1 7719272 7725637 1

1 Sequence

Length
3517

1 Sequence Ontology Term

Identifier Name Description
transcript