WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09F5.5.1 Sequence Name  K09F5.5.1
Length (nt)  1428   Chromosome Location  X: 7733334-7736271
Chromosome . Primary Identifier  X Chromosome Location . Start  7733334
Chromosome Location . End  7736271 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09F5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019584 set-12 K09F5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09F5.5 K09F5.5 1170   X: 7733608-7733628

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09F5.5.1 7733334 7736271 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240342   94   X: 7733334-7733427 Caenorhabditis elegans
Exon240343   62   X: 7733567-7733628 Caenorhabditis elegans
Exon240344   84   X: 7733675-7733758 Caenorhabditis elegans
Exon240345   406   X: 7733807-7734212 Caenorhabditis elegans
Exon240346   492   X: 7734465-7734956 Caenorhabditis elegans
Exon240347   92   X: 7735457-7735548 Caenorhabditis elegans
Exon240348   198   X: 7736074-7736271 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09F5.5.1 7733334 7736271 -1

1 Sequence

Length
1428

1 Sequence Ontology Term

Identifier Name Description
transcript