WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03G5.5b.1 Sequence Name  R03G5.5b.1
Length (nt)  731   Chromosome Location  X: 7798949-7799780
Chromosome . Primary Identifier  X Chromosome Location . Start  7798949
Chromosome Location . End  7799780 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03G5.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019846 gpx-7 R03G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03G5.5b R03G5.5b 318   X: 7799408-7799570

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03G5.5b.1 7798949 7799780 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240568   163   X: 7798949-7799111 Caenorhabditis elegans
Exon240571   413   X: 7799158-7799570 Caenorhabditis elegans
Exon240574   155   X: 7799626-7799780 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03G5.5b.1 7798949 7799780 -1

1 Sequence

Length
731

1 Sequence Ontology Term

Identifier Name Description
transcript