WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R03G5.2 Sequence Name  R03G5.2
Length (nt)  1011   Chromosome Location  X: 7816804-7816816
Chromosome . Primary Identifier  X Chromosome Location . Start  7816804
Chromosome Location . End  7816816
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03G5.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31210 SEK-1 38.7 336 Caenorhabditis elegans
 

Other

36 RNAi

WormBase ID
WBRNAi00113193
WBRNAi00085168
WBRNAi00051186
WBRNAi00017359
WBRNAi00076592
WBRNAi00077211
WBRNAi00077215
WBRNAi00077207
WBRNAi00095258
WBRNAi00113104
WBRNAi00093234
WBRNAi00093235
WBRNAi00095156
WBRNAi00095165
WBRNAi00095179
WBRNAi00095181
WBRNAi00117982
WBRNAi00112963
WBRNAi00095410
WBRNAi00095159
WBRNAi00095423
WBRNAi00095162
WBRNAi00095168
WBRNAi00095171
WBRNAi00095174
WBRNAi00095177
WBRNAi00092535
WBRNAi00085164
WBRNAi00085172
WBRNAi00097053

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R03G5.2 7816804 7816816 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004758 sek-1 R03G5.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:R03G5.2 7816804 7816816 1
CDS:R03G5.2 7816876 7816966 1
CDS:R03G5.2 7817074 7817206 1
CDS:R03G5.2 7818326 7818709 1
CDS:R03G5.2 7818861 7819111 1
CDS:R03G5.2 7819174 7819285 1
CDS:R03G5.2 7820037 7820063 1

1 Sequence

Length
1011

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R03G5.2.1 R03G5.2.1 2054   X: 7816734-7821036