WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G1C.8a Sequence Name  Y48G1C.8a
Length (nt)  4536   Chromosome Location  I: 96826-96992
Chromosome . Primary Identifier  I Chromosome Location . Start  96826
Chromosome Location . End  96992
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1C.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49446 Y48G1C.8, isoform a 171.1 1511 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00066106
WBRNAi00056958
WBRNAi00066735
WBRNAi00004684
WBRNAi00004685
WBRNAi00026763
WBRNAi00026764
WBRNAi00026766
WBRNAi00071767
WBRNAi00037270
WBRNAi00071100
WBRNAi00037271
WBRNAi00061694
WBRNAi00026765
WBRNAi00056957
WBRNAi00066548

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G1C.8a 96826 96992 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021681 Y48G1C.8 Y48G1C.8 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G1C.8a 96826 96992 -1
CDS:Y48G1C.8a 97600 97960 -1
CDS:Y48G1C.8a 98295 99058 -1
CDS:Y48G1C.8a 99629 99789 -1
CDS:Y48G1C.8a 100139 100323 -1
CDS:Y48G1C.8a 100395 100625 -1
CDS:Y48G1C.8a 101505 101733 -1
CDS:Y48G1C.8a 102448 103216 -1
CDS:Y48G1C.8a 104440 104713 -1
CDS:Y48G1C.8a 105436 105621 -1
CDS:Y48G1C.8a 106016 106334 -1
CDS:Y48G1C.8a 106689 106819 -1
CDS:Y48G1C.8a 107356 107548 -1
CDS:Y48G1C.8a 107596 108161 -1

1 Sequence

Length
4536

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G1C.8a.1 Y48G1C.8a.1 4965   I: 96459-108223