WormMine: Gene WBGene00200502

• WormBase Gene ID: WBGene00200502
• Gene Name: C54D2.14
• Sequence Name: C54D2.14
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by several genes including glh-4; glh-1; and pgl-1 based on RNA-seq studies. Is affected by Cadmium Chloride based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 293

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00200502

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C54D2.14	C54D2.14	293	X: 7825780-7826072

Other

0 CDSs

0 RNAi Result

12 Allele

• gk964260
• gk964193
• gk964194
• gk963896
• gk963732
• gk964088
• gk964087
• WBVar02121817
• WBVar01601968
• WBVar01849309
• gk286129
• gk286128

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00200502
• Start: 7825780
• End: 7826072
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_7826073..7827084
• Length (nt): 1012
• Chromosome Location: X: 7826073-7827084
• Organism: Caenorhabditis elegans

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(+), comparing to in control animals, at 2-day post L4 adult hermaphrodite stage.	DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2.	WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron
	Transcripts that showed significantly increased expression in N2 animals exposed to 30 uM CdCl2 for five days starting from L4.	edgeR, fold change > 2, p < 0.05.	WBPaper00066204:CdCl2_upregulated_mRNA
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_normal

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00200502
• Start: 7825780
• End: 7826072
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 293

1 Sequence Ontology Term