WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D2.4.1 Sequence Name  C54D2.4.1
Length (nt)  1746   Chromosome Location  X: 7827085-7834217
Chromosome . Primary Identifier  X Chromosome Location . Start  7827085
Chromosome Location . End  7834217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006310 sul-3 C54D2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D2.4 C54D2.4 1455   X: 7827194-7827323

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54D2.4.1 7827085 7834217 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240635   239   X: 7827085-7827323 Caenorhabditis elegans
Exon240636   55   X: 7827369-7827423 Caenorhabditis elegans
Exon240637   86   X: 7828091-7828176 Caenorhabditis elegans
Exon240638   100   X: 7828233-7828332 Caenorhabditis elegans
Exon240639   68   X: 7828387-7828454 Caenorhabditis elegans
Exon240640   137   X: 7829464-7829600 Caenorhabditis elegans
Exon240641   98   X: 7829651-7829748 Caenorhabditis elegans
Exon240642   64   X: 7829924-7829987 Caenorhabditis elegans
Exon240643   102   X: 7830044-7830145 Caenorhabditis elegans
Exon240644   110   X: 7831037-7831146 Caenorhabditis elegans
Exon240645   211   X: 7832231-7832441 Caenorhabditis elegans
Exon240646   52   X: 7832496-7832547 Caenorhabditis elegans
Exon240647   87   X: 7832610-7832696 Caenorhabditis elegans
Exon240648   337   X: 7833881-7834217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54D2.4.1 7827085 7834217 -1

1 Sequence

Length
1746

1 Sequence Ontology Term

Identifier Name Description
transcript