WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53G12.9a.1 Sequence Name  F53G12.9a.1
Length (nt)  929   Chromosome Location  I: 112285-113751
Chromosome . Primary Identifier  I Chromosome Location . Start  112285
Chromosome Location . End  113751 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G12.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018774 F53G12.9 F53G12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G12.9a F53G12.9a 759   I: 112365-112481

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.9a.1 112285 113751 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265   197   I: 112285-112481 Caenorhabditis elegans
Exon267   126   I: 112527-112652 Caenorhabditis elegans
Exon268   204   I: 112700-112903 Caenorhabditis elegans
Exon269   144   I: 113239-113382 Caenorhabditis elegans
Exon271   102   I: 113426-113527 Caenorhabditis elegans
Exon274   156   I: 113596-113751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.9a.1 112285 113751 1

1 Sequence

Length
929

1 Sequence Ontology Term

Identifier Name Description
transcript