WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53G12.7a Sequence Name  F53G12.7a
Length (nt)  984   Chromosome Location  I: 115739-115915
Chromosome . Primary Identifier  I Chromosome Location . Start  115739
Chromosome Location . End  115915
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G12.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11018 COL-45, isoform a 33.0 327 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048172
WBRNAi00003758
WBRNAi00032713

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53G12.7a 115739 115915 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000622 col-45 F53G12.7 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53G12.7a 115739 115915 1
CDS:F53G12.7a 116432 116666 1
CDS:F53G12.7a 116719 116974 1
CDS:F53G12.7a 117086 117401 1

1 Sequence

Length
984

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53G12.7a.1 F53G12.7a.1 1133   I: 115687-117498