WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C11.1.2 Sequence Name  F56C11.1.2
Length (nt)  5185   Chromosome Location  I: 145968-154855
Chromosome . Primary Identifier  I Chromosome Location . Start  145968
Chromosome Location . End  154855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C11.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000253 bli-3 F56C11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C11.1 F56C11.1 4494   I: 146623-146748

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C11.1.2 145968 154855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon352   781   I: 145968-146748 Caenorhabditis elegans
Exon356   132   I: 146793-146924 Caenorhabditis elegans
Exon358   678   I: 147054-147731 Caenorhabditis elegans
Exon360   211   I: 147784-147994 Caenorhabditis elegans
Exon362   125   I: 148099-148223 Caenorhabditis elegans
Exon364   200   I: 149060-149259 Caenorhabditis elegans
Exon366   170   I: 149303-149472 Caenorhabditis elegans
Exon368   298   I: 149520-149817 Caenorhabditis elegans
Exon370   298   I: 150391-150688 Caenorhabditis elegans
Exon372   449   I: 150734-151182 Caenorhabditis elegans
Exon374   157   I: 151227-151383 Caenorhabditis elegans
Exon376   214   I: 151461-151674 Caenorhabditis elegans
Exon378   292   I: 152069-152360 Caenorhabditis elegans
Exon380   252   I: 152407-152658 Caenorhabditis elegans
Exon382   204   I: 152706-152909 Caenorhabditis elegans
Exon384   390   I: 152956-153345 Caenorhabditis elegans
Exon386   159   I: 153395-153553 Caenorhabditis elegans
Exon388   78   I: 153603-153680 Caenorhabditis elegans
Exon390   97   I: 154759-154855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C11.1.2 145968 154855 -1

1 Sequence

Length
5185

1 Sequence Ontology Term

Identifier Name Description
transcript