WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C11.1.1 Sequence Name  F56C11.1.1
Length (nt)  4667   Chromosome Location  I: 146486-154855
Chromosome . Primary Identifier  I Chromosome Location . Start  146486
Chromosome Location . End  154855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000253 bli-3 F56C11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C11.1 F56C11.1 4494   I: 146623-146748

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C11.1.1 146486 154855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon354   263   I: 146486-146748 Caenorhabditis elegans
Exon355   132   I: 146793-146924 Caenorhabditis elegans
Exon357   678   I: 147054-147731 Caenorhabditis elegans
Exon359   211   I: 147784-147994 Caenorhabditis elegans
Exon361   125   I: 148099-148223 Caenorhabditis elegans
Exon363   200   I: 149060-149259 Caenorhabditis elegans
Exon365   170   I: 149303-149472 Caenorhabditis elegans
Exon367   298   I: 149520-149817 Caenorhabditis elegans
Exon369   298   I: 150391-150688 Caenorhabditis elegans
Exon371   449   I: 150734-151182 Caenorhabditis elegans
Exon373   157   I: 151227-151383 Caenorhabditis elegans
Exon375   214   I: 151461-151674 Caenorhabditis elegans
Exon377   292   I: 152069-152360 Caenorhabditis elegans
Exon379   252   I: 152407-152658 Caenorhabditis elegans
Exon381   204   I: 152706-152909 Caenorhabditis elegans
Exon383   390   I: 152956-153345 Caenorhabditis elegans
Exon385   159   I: 153395-153553 Caenorhabditis elegans
Exon387   78   I: 153603-153680 Caenorhabditis elegans
Exon389   97   I: 154759-154855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C11.1.1 146486 154855 -1

1 Sequence

Length
4667

1 Sequence Ontology Term

Identifier Name Description
transcript