WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56C11.2b Sequence Name  F56C11.2b
Length (nt)  2010   Chromosome Location  I: 160404-160546
Chromosome . Primary Identifier  I Chromosome Location . Start  160404
Chromosome Location . End  160546
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C11.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49167 PTR-11, isoform b 73.9 669 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00048650
WBRNAi00076951
WBRNAi00076919
WBRNAi00003809
WBRNAi00032935
WBRNAi00075794

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56C11.2b 160404 160546 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004225 ptr-11 F56C11.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56C11.2b 160404 160546 -1
CDS:F56C11.2b 160712 160999 -1
CDS:F56C11.2b 161597 161889 -1
CDS:F56C11.2b 162368 162597 -1
CDS:F56C11.2b 162645 162717 -1
CDS:F56C11.2b 163099 163430 -1
CDS:F56C11.2b 163500 163608 -1
CDS:F56C11.2b 163809 164203 -1
CDS:F56C11.2b 164677 164765 -1
CDS:F56C11.2b 164900 164957 -1

1 Sequence

Length
2010

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56C11.2b.1 F56C11.2b.1 2010   I: 160404-164957