WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39D10.7.1 Sequence Name  C39D10.7.1
Length (nt)  3572   Chromosome Location  X: 7907966-7913930
Chromosome . Primary Identifier  X Chromosome Location . Start  7907966
Chromosome Location . End  7913930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39D10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016534 C39D10.7 C39D10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39D10.7 C39D10.7 3516   X: 7908022-7908429

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39D10.7.1 7907966 7913930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240971   464   X: 7907966-7908429 Caenorhabditis elegans
Exon240972   97   X: 7908478-7908574 Caenorhabditis elegans
Exon240973   110   X: 7908621-7908730 Caenorhabditis elegans
Exon240974   115   X: 7908776-7908890 Caenorhabditis elegans
Exon240975   94   X: 7908995-7909088 Caenorhabditis elegans
Exon240976   1022   X: 7909143-7910164 Caenorhabditis elegans
Exon240977   261   X: 7910806-7911066 Caenorhabditis elegans
Exon240978   246   X: 7911113-7911358 Caenorhabditis elegans
Exon240979   423   X: 7911536-7911958 Caenorhabditis elegans
Exon240980   184   X: 7912030-7912213 Caenorhabditis elegans
Exon240981   170   X: 7912259-7912428 Caenorhabditis elegans
Exon240982   105   X: 7912482-7912586 Caenorhabditis elegans
Exon240983   134   X: 7912642-7912775 Caenorhabditis elegans
Exon240984   147   X: 7913784-7913930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39D10.7.1 7907966 7913930 -1

1 Sequence

Length
3572

1 Sequence Ontology Term

Identifier Name Description
transcript