WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F5.3a.2 Sequence Name  C14F5.3a.2
Length (nt)  1453   Chromosome Location  X: 7937633-7944559
Chromosome . Primary Identifier  X Chromosome Location . Start  7937633
Chromosome Location . End  7944559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F5.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006588 tnt-3 C14F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F5.3a C14F5.3a 1149   X: 7937920-7937937

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3a.2 7937633 7944559 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240992   305   X: 7937633-7937937 Caenorhabditis elegans
Exon241001   63   X: 7937991-7938053 Caenorhabditis elegans
Exon241009   147   X: 7938516-7938662 Caenorhabditis elegans
Exon241021   78   X: 7940199-7940276 Caenorhabditis elegans
Exon241029   96   X: 7940324-7940419 Caenorhabditis elegans
Exon241040   156   X: 7940469-7940624 Caenorhabditis elegans
Exon241055   109   X: 7940884-7940992 Caenorhabditis elegans
Exon241066   104   X: 7941080-7941183 Caenorhabditis elegans
Exon241077   204   X: 7941228-7941431 Caenorhabditis elegans
Exon241088   64   X: 7941480-7941543 Caenorhabditis elegans
Exon241099   87   X: 7941604-7941690 Caenorhabditis elegans
Exon241119   40   X: 7944520-7944559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3a.2 7937633 7944559 -1

1 Sequence

Length
1453

1 Sequence Ontology Term

Identifier Name Description
transcript