WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F5.3e.1 Sequence Name  C14F5.3e.1
Length (nt)  4191   Chromosome Location  X: 7937633-7944708
Chromosome . Primary Identifier  X Chromosome Location . Start  7937633
Chromosome Location . End  7944708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F5.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006588 tnt-3 C14F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F5.3e C14F5.3e 3708   X: 7937920-7937937

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3e.1 7937633 7944708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240994   305   X: 7937633-7937937 Caenorhabditis elegans
Exon241005   63   X: 7937991-7938053 Caenorhabditis elegans
Exon241011   147   X: 7938516-7938662 Caenorhabditis elegans
Exon241025   78   X: 7940199-7940276 Caenorhabditis elegans
Exon241036   96   X: 7940324-7940419 Caenorhabditis elegans
Exon241047   156   X: 7940469-7940624 Caenorhabditis elegans
Exon241062   109   X: 7940884-7940992 Caenorhabditis elegans
Exon241073   104   X: 7941080-7941183 Caenorhabditis elegans
Exon241084   204   X: 7941228-7941431 Caenorhabditis elegans
Exon241095   64   X: 7941480-7941543 Caenorhabditis elegans
Exon241106   87   X: 7941604-7941690 Caenorhabditis elegans
Exon241109   2778   X: 7941931-7944708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3e.1 7937633 7944708 -1

1 Sequence

Length
4191

1 Sequence Ontology Term

Identifier Name Description
transcript