WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F5.3a.1 Sequence Name  C14F5.3a.1
Length (nt)  1517   Chromosome Location  X: 7937633-7945051
Chromosome . Primary Identifier  X Chromosome Location . Start  7937633
Chromosome Location . End  7945051 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006588 tnt-3 C14F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F5.3a C14F5.3a 1149   X: 7937920-7937937

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3a.1 7937633 7945051 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240993   305   X: 7937633-7937937 Caenorhabditis elegans
Exon241000   63   X: 7937991-7938053 Caenorhabditis elegans
Exon241008   147   X: 7938516-7938662 Caenorhabditis elegans
Exon241020   78   X: 7940199-7940276 Caenorhabditis elegans
Exon241028   96   X: 7940324-7940419 Caenorhabditis elegans
Exon241039   156   X: 7940469-7940624 Caenorhabditis elegans
Exon241054   109   X: 7940884-7940992 Caenorhabditis elegans
Exon241065   104   X: 7941080-7941183 Caenorhabditis elegans
Exon241076   204   X: 7941228-7941431 Caenorhabditis elegans
Exon241087   64   X: 7941480-7941543 Caenorhabditis elegans
Exon241098   87   X: 7941604-7941690 Caenorhabditis elegans
Exon241116   38   X: 7944520-7944557 Caenorhabditis elegans
Exon241120   66   X: 7944986-7945051 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3a.1 7937633 7945051 -1

1 Sequence

Length
1517

1 Sequence Ontology Term

Identifier Name Description
transcript