WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F5.3c.1 Sequence Name  C14F5.3c.1
Length (nt)  1462   Chromosome Location  X: 7937635-7944542
Chromosome . Primary Identifier  X Chromosome Location . Start  7937635
Chromosome Location . End  7944542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F5.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006588 tnt-3 C14F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F5.3c C14F5.3c 840   X: 7940355-7940419

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3c.1 7937635 7944542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240996   303   X: 7937635-7937937 Caenorhabditis elegans
Exon241002   63   X: 7937991-7938053 Caenorhabditis elegans
Exon241010   147   X: 7938516-7938662 Caenorhabditis elegans
Exon241022   78   X: 7940199-7940276 Caenorhabditis elegans
Exon241031   96   X: 7940324-7940419 Caenorhabditis elegans
Exon241042   156   X: 7940469-7940624 Caenorhabditis elegans
Exon241050   28   X: 7940797-7940824 Caenorhabditis elegans
Exon241057   109   X: 7940884-7940992 Caenorhabditis elegans
Exon241068   104   X: 7941080-7941183 Caenorhabditis elegans
Exon241079   204   X: 7941228-7941431 Caenorhabditis elegans
Exon241090   64   X: 7941480-7941543 Caenorhabditis elegans
Exon241101   87   X: 7941604-7941690 Caenorhabditis elegans
Exon241112   23   X: 7944520-7944542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3c.1 7937635 7944542 -1

1 Sequence

Length
1462

1 Sequence Ontology Term

Identifier Name Description
transcript