WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F5.3f.1 Sequence Name  C14F5.3f.1
Length (nt)  1416   Chromosome Location  X: 7937635-7945099
Chromosome . Primary Identifier  X Chromosome Location . Start  7937635
Chromosome Location . End  7945099 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F5.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006588 tnt-3 C14F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F5.3f C14F5.3f 1002   X: 7937920-7937937

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3f.1 7937635 7945099 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240998   303   X: 7937635-7937937 Caenorhabditis elegans
Exon241006   63   X: 7937991-7938053 Caenorhabditis elegans
Exon241026   78   X: 7940199-7940276 Caenorhabditis elegans
Exon241037   96   X: 7940324-7940419 Caenorhabditis elegans
Exon241048   156   X: 7940469-7940624 Caenorhabditis elegans
Exon241063   109   X: 7940884-7940992 Caenorhabditis elegans
Exon241074   104   X: 7941080-7941183 Caenorhabditis elegans
Exon241085   204   X: 7941228-7941431 Caenorhabditis elegans
Exon241096   64   X: 7941480-7941543 Caenorhabditis elegans
Exon241107   87   X: 7941604-7941690 Caenorhabditis elegans
Exon241117   38   X: 7944520-7944557 Caenorhabditis elegans
Exon241121   114   X: 7944986-7945099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3f.1 7937635 7945099 -1

1 Sequence

Length
1416

1 Sequence Ontology Term

Identifier Name Description
transcript