WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F5.3c.4 Sequence Name  C14F5.3c.4
Length (nt)  1454   Chromosome Location  X: 7939548-7944542
Chromosome . Primary Identifier  X Chromosome Location . Start  7939548
Chromosome Location . End  7944542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F5.3c.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006588 tnt-3 C14F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F5.3c C14F5.3c 840   X: 7940355-7940419

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3c.4 7939548 7944542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241013   376   X: 7939548-7939923 Caenorhabditis elegans
Exon241017   207   X: 7939970-7940176 Caenorhabditis elegans
Exon241034   96   X: 7940324-7940419 Caenorhabditis elegans
Exon241045   156   X: 7940469-7940624 Caenorhabditis elegans
Exon241053   28   X: 7940797-7940824 Caenorhabditis elegans
Exon241060   109   X: 7940884-7940992 Caenorhabditis elegans
Exon241071   104   X: 7941080-7941183 Caenorhabditis elegans
Exon241082   204   X: 7941228-7941431 Caenorhabditis elegans
Exon241093   64   X: 7941480-7941543 Caenorhabditis elegans
Exon241104   87   X: 7941604-7941690 Caenorhabditis elegans
Exon241115   23   X: 7944520-7944542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F5.3c.4 7939548 7944542 -1

1 Sequence

Length
1454

1 Sequence Ontology Term

Identifier Name Description
transcript