WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45E1.7b Sequence Name  F45E1.7b
Length (nt)  1488   Chromosome Location  X: 7989195-7989245
Chromosome . Primary Identifier  X Chromosome Location . Start  7989195
Chromosome Location . End  7989245
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E1.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37111 SDPN-1, isoform b 55.7 495 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001598
WBRNAi00047390
WBRNAi00015015
WBRNAi00033484
WBRNAi00065624

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E1.7b 7989195 7989245 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018467 sdpn-1 F45E1.7 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E1.7b 7989195 7989245 -1
CDS:F45E1.7b 7989294 7989632 -1
CDS:F45E1.7b 7989684 7989869 -1
CDS:F45E1.7b 7989939 7990068 -1
CDS:F45E1.7b 7990113 7990244 -1
CDS:F45E1.7b 7990463 7990587 -1
CDS:F45E1.7b 7991463 7991573 -1
CDS:F45E1.7b 7992208 7992306 -1
CDS:F45E1.7b 7992358 7992582 -1
CDS:F45E1.7b 7992737 7992809 -1
CDS:F45E1.7b 7998079 7998095 -1

1 Sequence

Length
1488

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E1.7b.1 F45E1.7b.1 1488   X: 7989195-7998095