WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D10.2a.1 Sequence Name  C34D10.2a.1
Length (nt)  3639   Chromosome Location  X: 8014983-8026868
Chromosome . Primary Identifier  X Chromosome Location . Start  8014983
Chromosome Location . End  8026868 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016407 unk-1 C34D10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D10.2a C34D10.2a 2028   X: 8019228-8019334

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D10.2a.1 8014983 8026868 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241212   89   X: 8014983-8015071 Caenorhabditis elegans
Exon241218   181   X: 8019154-8019334 Caenorhabditis elegans
Exon241221   114   X: 8020564-8020677 Caenorhabditis elegans
Exon241225   96   X: 8020723-8020818 Caenorhabditis elegans
Exon241229   112   X: 8020869-8020980 Caenorhabditis elegans
Exon241233   54   X: 8021189-8021242 Caenorhabditis elegans
Exon241237   91   X: 8021291-8021381 Caenorhabditis elegans
Exon241242   136   X: 8022774-8022909 Caenorhabditis elegans
Exon241245   154   X: 8023109-8023262 Caenorhabditis elegans
Exon241250   133   X: 8023800-8023932 Caenorhabditis elegans
Exon241254   179   X: 8023987-8024165 Caenorhabditis elegans
Exon241258   268   X: 8024240-8024507 Caenorhabditis elegans
Exon241262   116   X: 8024552-8024667 Caenorhabditis elegans
Exon241266   366   X: 8024716-8025081 Caenorhabditis elegans
Exon241271   1550   X: 8025319-8026868 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D10.2a.1 8014983 8026868 1

1 Sequence

Length
3639

1 Sequence Ontology Term

Identifier Name Description
transcript