WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D10.2a.3 Sequence Name  C34D10.2a.3
Length (nt)  3553   Chromosome Location  X: 8019152-8026869
Chromosome . Primary Identifier  X Chromosome Location . Start  8019152
Chromosome Location . End  8026869 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D10.2a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016407 unk-1 C34D10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D10.2a C34D10.2a 2028   X: 8019228-8019334

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D10.2a.3 8019152 8026869 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241217   183   X: 8019152-8019334 Caenorhabditis elegans
Exon241223   114   X: 8020564-8020677 Caenorhabditis elegans
Exon241227   96   X: 8020723-8020818 Caenorhabditis elegans
Exon241231   112   X: 8020869-8020980 Caenorhabditis elegans
Exon241235   54   X: 8021189-8021242 Caenorhabditis elegans
Exon241239   91   X: 8021291-8021381 Caenorhabditis elegans
Exon241244   136   X: 8022774-8022909 Caenorhabditis elegans
Exon241247   154   X: 8023109-8023262 Caenorhabditis elegans
Exon241252   133   X: 8023800-8023932 Caenorhabditis elegans
Exon241256   179   X: 8023987-8024165 Caenorhabditis elegans
Exon241260   268   X: 8024240-8024507 Caenorhabditis elegans
Exon241264   116   X: 8024552-8024667 Caenorhabditis elegans
Exon241268   366   X: 8024716-8025081 Caenorhabditis elegans
Exon241273   1551   X: 8025319-8026869 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D10.2a.3 8019152 8026869 1

1 Sequence

Length
3553

1 Sequence Ontology Term

Identifier Name Description
transcript