WormMine: MRNA Transcript:Y50C1A.1a.1

• WormMine ID: Transcript:Y50C1A.1a.1
• Sequence Name: Y50C1A.1a.1
• Length (nt): 2395
• Chromosome Location: I: 398891-412918
• Chromosome . Primary Identifier: I
• Chromosome Location . Start: 398891
• Chromosome Location . End: 412918
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: Y50C1A.1a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00021733	otub-2	Y50C1A.1	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:Y50C1A.1a	Y50C1A.1a	1929	I: 398949-399048

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: Transcript:Y50C1A.1a.1
• Start: 398891
• End: 412918
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

12 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon834			158	I: 398891-399048	Caenorhabditis elegans
Exon835			81	I: 399189-399269	Caenorhabditis elegans
Exon836			153	I: 399953-400105	Caenorhabditis elegans
Exon837			93	I: 401955-402047	Caenorhabditis elegans
Exon839			125	I: 402293-402417	Caenorhabditis elegans
Exon840			204	I: 403514-403717	Caenorhabditis elegans
Exon842			169	I: 406063-406231	Caenorhabditis elegans
Exon844			175	I: 407370-407544	Caenorhabditis elegans
Exon846			243	I: 408521-408763	Caenorhabditis elegans
Exon848			283	I: 410344-410626	Caenorhabditis elegans
Exon850			233	I: 411203-411435	Caenorhabditis elegans
Exon853			478	I: 412441-412918	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:Y50C1A.1a.1
• Start: 398891
• End: 412918
• Strand: 1

1 Sequence

• Length: 2395

1 Sequence Ontology Term

• Name: transcript