WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18A11.5c.1 Sequence Name  C18A11.5c.1
Length (nt)  1281   Chromosome Location  X: 8041327-8044409
Chromosome . Primary Identifier  X Chromosome Location . Start  8041327
Chromosome Location . End  8044409 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18A11.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006962 xol-1 C18A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18A11.5c C18A11.5c 1281   X: 8041327-8041403

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18A11.5c.1 8041327 8044409 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241286   77   X: 8041327-8041403 Caenorhabditis elegans
Exon241288   91   X: 8041451-8041541 Caenorhabditis elegans
Exon241291   186   X: 8041586-8041771 Caenorhabditis elegans
Exon241294   82   X: 8042227-8042308 Caenorhabditis elegans
Exon241296   154   X: 8042355-8042508 Caenorhabditis elegans
Exon241299   376   X: 8042555-8042930 Caenorhabditis elegans
Exon241302   315   X: 8044095-8044409 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18A11.5c.1 8041327 8044409 1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
transcript