WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E3.4a.1 Sequence Name  K07E3.4a.1
Length (nt)  2126   Chromosome Location  X: 8080868-8083402
Chromosome . Primary Identifier  X Chromosome Location . Start  8080868
Chromosome Location . End  8083402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019492 K07E3.4 K07E3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E3.4a K07E3.4a 1923   X: 8081015-8081175

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E3.4a.1 8080868 8083402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241352   308   X: 8080868-8081175 Caenorhabditis elegans
Exon241354   949   X: 8081363-8082311 Caenorhabditis elegans
Exon241356   254   X: 8082364-8082617 Caenorhabditis elegans
Exon241358   457   X: 8082677-8083133 Caenorhabditis elegans
Exon241360   99   X: 8083183-8083281 Caenorhabditis elegans
Exon241362   59   X: 8083344-8083402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E3.4a.1 8080868 8083402 -1

1 Sequence

Length
2126

1 Sequence Ontology Term

Identifier Name Description
transcript