WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E3.7a.4 Sequence Name  K07E3.7a.4
Length (nt)  4152   Chromosome Location  X: 8089785-8096432
Chromosome . Primary Identifier  X Chromosome Location . Start  8089785
Chromosome Location . End  8096432 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E3.7a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019493 catp-5 K07E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E3.7a K07E3.7a 3525   X: 8090375-8090531

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E3.7a.4 8089785 8096432 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241393   747   X: 8089785-8090531 Caenorhabditis elegans
Exon241400   179   X: 8091334-8091512 Caenorhabditis elegans
Exon241405   213   X: 8091559-8091771 Caenorhabditis elegans
Exon241410   162   X: 8091821-8091982 Caenorhabditis elegans
Exon241415   282   X: 8092025-8092306 Caenorhabditis elegans
Exon241420   480   X: 8092354-8092833 Caenorhabditis elegans
Exon241425   105   X: 8092886-8092990 Caenorhabditis elegans
Exon241430   139   X: 8093038-8093176 Caenorhabditis elegans
Exon241435   398   X: 8093570-8093967 Caenorhabditis elegans
Exon241440   351   X: 8094018-8094368 Caenorhabditis elegans
Exon241445   255   X: 8094749-8095003 Caenorhabditis elegans
Exon241450   190   X: 8095045-8095234 Caenorhabditis elegans
Exon241455   293   X: 8095283-8095575 Caenorhabditis elegans
Exon241460   204   X: 8095627-8095830 Caenorhabditis elegans
Exon241466   154   X: 8096279-8096432 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E3.7a.4 8089785 8096432 -1

1 Sequence

Length
4152

1 Sequence Ontology Term

Identifier Name Description
transcript