WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y65B4BL.2b.1 Sequence Name  Y65B4BL.2b.1
Length (nt)  1725   Chromosome Location  I: 506663-508876
Chromosome . Primary Identifier  I Chromosome Location . Start  506663
Chromosome Location . End  508876 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BL.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022034 deps-1 Y65B4BL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4BL.2b Y65B4BL.2b 1725   I: 506663-506745

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BL.2b.1 506663 508876 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon962   83   I: 506663-506745 Caenorhabditis elegans
Exon964   215   I: 506802-507016 Caenorhabditis elegans
Exon966   161   I: 507065-507225 Caenorhabditis elegans
Exon968   132   I: 507277-507408 Caenorhabditis elegans
Exon970   252   I: 507454-507705 Caenorhabditis elegans
Exon972   141   I: 507755-507895 Caenorhabditis elegans
Exon974   105   I: 507944-508048 Caenorhabditis elegans
Exon976   234   I: 508098-508331 Caenorhabditis elegans
Exon978   110   I: 508382-508491 Caenorhabditis elegans
Exon980   220   I: 508538-508757 Caenorhabditis elegans
Exon981   72   I: 508805-508876 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BL.2b.1 506663 508876 1

1 Sequence

Length
1725

1 Sequence Ontology Term

Identifier Name Description
transcript