WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E3.7c.1 Sequence Name  K07E3.7c.1
Length (nt)  3609   Chromosome Location  X: 8090375-8097185
Chromosome . Primary Identifier  X Chromosome Location . Start  8090375
Chromosome Location . End  8097185 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E3.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019493 catp-5 K07E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E3.7c K07E3.7c 3609   X: 8090375-8090531

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K07E3.7c.1 8090375 8097185 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241376   157   X: 8090375-8090531 Caenorhabditis elegans
Exon241381   179   X: 8091334-8091512 Caenorhabditis elegans
Exon241386   213   X: 8091559-8091771 Caenorhabditis elegans
Exon241391   162   X: 8091821-8091982 Caenorhabditis elegans
Exon241396   282   X: 8092025-8092306 Caenorhabditis elegans
Exon241401   480   X: 8092354-8092833 Caenorhabditis elegans
Exon241406   105   X: 8092886-8092990 Caenorhabditis elegans
Exon241411   139   X: 8093038-8093176 Caenorhabditis elegans
Exon241416   398   X: 8093570-8093967 Caenorhabditis elegans
Exon241421   351   X: 8094018-8094368 Caenorhabditis elegans
Exon241426   255   X: 8094749-8095003 Caenorhabditis elegans
Exon241431   190   X: 8095045-8095234 Caenorhabditis elegans
Exon241436   293   X: 8095283-8095575 Caenorhabditis elegans
Exon241441   204   X: 8095627-8095830 Caenorhabditis elegans
Exon241445   152   X: 8096279-8096430 Caenorhabditis elegans
Exon241450   46   X: 8096662-8096707 Caenorhabditis elegans
Exon241451   3   X: 8097183-8097185 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K07E3.7c.1 8090375 8097185 -1

1 Sequence

Length
3609

1 Sequence Ontology Term

Identifier Name Description
transcript