WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E3.1.1 Sequence Name  K07E3.1.1
Length (nt)  3998   Chromosome Location  X: 8110439-8114762
Chromosome . Primary Identifier  X Chromosome Location . Start  8110439
Chromosome Location . End  8114762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019490 K07E3.1 K07E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E3.1 K07E3.1 3153   X: 8110449-8110593

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E3.1.1 8110439 8114762 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241470   155   X: 8110439-8110593 Caenorhabditis elegans
Exon241471   178   X: 8110639-8110816 Caenorhabditis elegans
Exon241472   231   X: 8110895-8111125 Caenorhabditis elegans
Exon241473   1598   X: 8111177-8112774 Caenorhabditis elegans
Exon241474   548   X: 8112825-8113372 Caenorhabditis elegans
Exon241475   265   X: 8113419-8113683 Caenorhabditis elegans
Exon241476   1023   X: 8113740-8114762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E3.1.1 8110439 8114762 1

1 Sequence

Length
3998

1 Sequence Ontology Term

Identifier Name Description
transcript