WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H11.6a.1 Sequence Name  C17H11.6a.1
Length (nt)  2720   Chromosome Location  X: 8185164-8193273
Chromosome . Primary Identifier  X Chromosome Location . Start  8185164
Chromosome Location . End  8193273 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H11.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015926 C17H11.6 C17H11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H11.6a C17H11.6a 2247   X: 8185637-8185970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H11.6a.1 8185164 8193273 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241572   807   X: 8185164-8185970 Caenorhabditis elegans
Exon241580   184   X: 8186434-8186617 Caenorhabditis elegans
Exon241586   105   X: 8188074-8188178 Caenorhabditis elegans
Exon241592   181   X: 8188225-8188405 Caenorhabditis elegans
Exon241598   68   X: 8188777-8188844 Caenorhabditis elegans
Exon241605   147   X: 8189810-8189956 Caenorhabditis elegans
Exon241610   147   X: 8190168-8190314 Caenorhabditis elegans
Exon241615   204   X: 8190593-8190796 Caenorhabditis elegans
Exon241620   213   X: 8191084-8191296 Caenorhabditis elegans
Exon241625   218   X: 8191346-8191563 Caenorhabditis elegans
Exon241630   111   X: 8192244-8192354 Caenorhabditis elegans
Exon241635   83   X: 8192414-8192496 Caenorhabditis elegans
Exon241640   111   X: 8192546-8192656 Caenorhabditis elegans
Exon241645   141   X: 8193133-8193273 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H11.6a.1 8185164 8193273 -1

1 Sequence

Length
2720

1 Sequence Ontology Term

Identifier Name Description
transcript