WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H11.6c.3 Sequence Name  C17H11.6c.3
Length (nt)  3251   Chromosome Location  X: 8185178-8203782
Chromosome . Primary Identifier  X Chromosome Location . Start  8185178
Chromosome Location . End  8203782 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H11.6c.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015926 C17H11.6 C17H11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H11.6c C17H11.6c 2337   X: 8185637-8185970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H11.6c.3 8185178 8203782 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241573   793   X: 8185178-8185970 Caenorhabditis elegans
Exon241583   184   X: 8186434-8186617 Caenorhabditis elegans
Exon241589   105   X: 8188074-8188178 Caenorhabditis elegans
Exon241595   181   X: 8188225-8188405 Caenorhabditis elegans
Exon241601   68   X: 8188777-8188844 Caenorhabditis elegans
Exon241608   147   X: 8189810-8189956 Caenorhabditis elegans
Exon241613   147   X: 8190168-8190314 Caenorhabditis elegans
Exon241618   204   X: 8190593-8190796 Caenorhabditis elegans
Exon241623   213   X: 8191084-8191296 Caenorhabditis elegans
Exon241628   218   X: 8191346-8191563 Caenorhabditis elegans
Exon241633   111   X: 8192244-8192354 Caenorhabditis elegans
Exon241638   83   X: 8192414-8192496 Caenorhabditis elegans
Exon241643   111   X: 8192546-8192656 Caenorhabditis elegans
Exon241648   169   X: 8193133-8193301 Caenorhabditis elegans
Exon241652   111   X: 8194652-8194762 Caenorhabditis elegans
Exon241662   406   X: 8203377-8203782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H11.6c.3 8185178 8203782 -1

1 Sequence

Length
3251

1 Sequence Ontology Term

Identifier Name Description
transcript