WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H11.6c.1 Sequence Name  C17H11.6c.1
Length (nt)  2844   Chromosome Location  X: 8185179-8194762
Chromosome . Primary Identifier  X Chromosome Location . Start  8185179
Chromosome Location . End  8194762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H11.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015926 C17H11.6 C17H11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H11.6c C17H11.6c 2337   X: 8185637-8185970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H11.6c.1 8185179 8194762 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241575   792   X: 8185179-8185970 Caenorhabditis elegans
Exon241581   184   X: 8186434-8186617 Caenorhabditis elegans
Exon241587   105   X: 8188074-8188178 Caenorhabditis elegans
Exon241593   181   X: 8188225-8188405 Caenorhabditis elegans
Exon241599   68   X: 8188777-8188844 Caenorhabditis elegans
Exon241606   147   X: 8189810-8189956 Caenorhabditis elegans
Exon241611   147   X: 8190168-8190314 Caenorhabditis elegans
Exon241616   204   X: 8190593-8190796 Caenorhabditis elegans
Exon241621   213   X: 8191084-8191296 Caenorhabditis elegans
Exon241626   218   X: 8191346-8191563 Caenorhabditis elegans
Exon241631   111   X: 8192244-8192354 Caenorhabditis elegans
Exon241636   83   X: 8192414-8192496 Caenorhabditis elegans
Exon241641   111   X: 8192546-8192656 Caenorhabditis elegans
Exon241646   169   X: 8193133-8193301 Caenorhabditis elegans
Exon241650   111   X: 8194652-8194762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H11.6c.1 8185179 8194762 -1

1 Sequence

Length
2844

1 Sequence Ontology Term

Identifier Name Description
transcript