WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H11.6d.1 Sequence Name  C17H11.6d.1
Length (nt)  2682   Chromosome Location  X: 8185637-8203779
Chromosome . Primary Identifier  X Chromosome Location . Start  8185637
Chromosome Location . End  8203779 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H11.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015926 C17H11.6 C17H11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H11.6d C17H11.6d 2682   X: 8185637-8185970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C17H11.6d.1 8185637 8203779 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241578   334   X: 8185637-8185970 Caenorhabditis elegans
Exon241584   184   X: 8186434-8186617 Caenorhabditis elegans
Exon241590   105   X: 8188074-8188178 Caenorhabditis elegans
Exon241596   181   X: 8188225-8188405 Caenorhabditis elegans
Exon241602   68   X: 8188777-8188844 Caenorhabditis elegans
Exon241609   147   X: 8189810-8189956 Caenorhabditis elegans
Exon241614   147   X: 8190168-8190314 Caenorhabditis elegans
Exon241619   204   X: 8190593-8190796 Caenorhabditis elegans
Exon241624   213   X: 8191084-8191296 Caenorhabditis elegans
Exon241629   218   X: 8191346-8191563 Caenorhabditis elegans
Exon241634   111   X: 8192244-8192354 Caenorhabditis elegans
Exon241639   83   X: 8192414-8192496 Caenorhabditis elegans
Exon241644   111   X: 8192546-8192656 Caenorhabditis elegans
Exon241649   169   X: 8193133-8193301 Caenorhabditis elegans
Exon241653   111   X: 8194652-8194762 Caenorhabditis elegans
Exon241661   247   X: 8203377-8203623 Caenorhabditis elegans
Exon241663   49   X: 8203731-8203779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C17H11.6d.1 8185637 8203779 -1

1 Sequence

Length
2682

1 Sequence Ontology Term

Identifier Name Description
transcript