WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B9.1e.1 Sequence Name  F13B9.1e.1
Length (nt)  4722   Chromosome Location  X: 8287261-8294117
Chromosome . Primary Identifier  X Chromosome Location . Start  8287261
Chromosome Location . End  8294117 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B9.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017419 sec-16A.2 F13B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B9.1e F13B9.1e 4722   X: 8287261-8287495

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13B9.1e.1 8287261 8294117 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241783   235   X: 8287261-8287495 Caenorhabditis elegans
Exon241791   155   X: 8287563-8287717 Caenorhabditis elegans
Exon241797   393   X: 8287764-8288156 Caenorhabditis elegans
Exon241807   204   X: 8288601-8288804 Caenorhabditis elegans
Exon241813   179   X: 8288852-8289030 Caenorhabditis elegans
Exon241819   1084   X: 8289076-8290159 Caenorhabditis elegans
Exon241825   107   X: 8290221-8290327 Caenorhabditis elegans
Exon241832   403   X: 8290712-8291114 Caenorhabditis elegans
Exon241838   327   X: 8291165-8291491 Caenorhabditis elegans
Exon241844   209   X: 8291568-8291776 Caenorhabditis elegans
Exon241850   249   X: 8291824-8292072 Caenorhabditis elegans
Exon241856   291   X: 8292126-8292416 Caenorhabditis elegans
Exon241862   674   X: 8292469-8293142 Caenorhabditis elegans
Exon241864   212   X: 8293906-8294117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13B9.1e.1 8287261 8294117 1

1 Sequence

Length
4722

1 Sequence Ontology Term

Identifier Name Description
transcript