WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.7a.1 Sequence Name  Y18H1A.7a.1
Length (nt)  1605   Chromosome Location  I: 717890-719944
Chromosome . Primary Identifier  I Chromosome Location . Start  717890
Chromosome Location . End  719944 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004332 rec-1 Y18H1A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.7a Y18H1A.7a 1110   I: 718125-718238

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.7a.1 717890 719944 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1415   349   I: 717890-718238 Caenorhabditis elegans
Exon1418   77   I: 718288-718364 Caenorhabditis elegans
Exon1419   781   I: 718657-719437 Caenorhabditis elegans
Exon1420   104   I: 719498-719601 Caenorhabditis elegans
Exon1421   294   I: 719651-719944 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.7a.1 717890 719944 -1

1 Sequence

Length
1605

1 Sequence Ontology Term

Identifier Name Description
transcript