WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09F10.4.1 Sequence Name  R09F10.4.1
Length (nt)  1704   Chromosome Location  X: 8300027-8302399
Chromosome . Primary Identifier  X Chromosome Location . Start  8300027
Chromosome Location . End  8302399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09F10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002127 inx-5 R09F10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09F10.4 R09F10.4 1344   X: 8300363-8300744

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09F10.4.1 8300027 8302399 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241881   718   X: 8300027-8300744 Caenorhabditis elegans
Exon241882   257   X: 8300796-8301052 Caenorhabditis elegans
Exon241883   299   X: 8301098-8301396 Caenorhabditis elegans
Exon241884   100   X: 8301450-8301549 Caenorhabditis elegans
Exon241885   268   X: 8301777-8302044 Caenorhabditis elegans
Exon241886   62   X: 8302338-8302399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09F10.4.1 8300027 8302399 -1

1 Sequence

Length
1704

1 Sequence Ontology Term

Identifier Name Description
transcript