WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.13.1 Sequence Name  Y18H1A.13.1
Length (nt)  2791   Chromosome Location  I: 741878-747213
Chromosome . Primary Identifier  I Chromosome Location . Start  741878
Chromosome Location . End  747213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.13 Y18H1A.13 906   I: 742004-742075

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.13.1 741878 747213 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1466   198   I: 741878-742075 Caenorhabditis elegans
Exon1468   360   I: 742809-743168 Caenorhabditis elegans
Exon1469   312   I: 743213-743524 Caenorhabditis elegans
Exon1470   1921   I: 745293-747213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.13.1 741878 747213 -1

1 Sequence

Length
2791

1 Sequence Ontology Term

Identifier Name Description
transcript