WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.12b.1 Sequence Name  Y18H1A.12b.1
Length (nt)  519   Chromosome Location  I: 746873-748269
Chromosome . Primary Identifier  I Chromosome Location . Start  746873
Chromosome Location . End  748269 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000624 col-47 Y18H1A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.12b Y18H1A.12b 519   I: 746873-746909

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.12b.1 746873 748269 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1473   37   I: 746873-746909 Caenorhabditis elegans
Exon1475   386   I: 746955-747340 Caenorhabditis elegans
Exon1476   96   I: 748174-748269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.12b.1 746873 748269 1

1 Sequence

Length
519

1 Sequence Ontology Term

Identifier Name Description
transcript