WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D9.1.1 Sequence Name  F41D9.1.1
Length (nt)  2701   Chromosome Location  X: 8378557-8382711
Chromosome . Primary Identifier  X Chromosome Location . Start  8378557
Chromosome Location . End  8382711 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018281 tbc-18 F41D9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D9.1 F41D9.1 2481   X: 8378604-8378622

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.1.1 8378557 8382711 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242010   66   X: 8378557-8378622 Caenorhabditis elegans
Exon242011   86   X: 8378703-8378788 Caenorhabditis elegans
Exon242012   104   X: 8378917-8379020 Caenorhabditis elegans
Exon242013   117   X: 8379066-8379182 Caenorhabditis elegans
Exon242014   248   X: 8379233-8379480 Caenorhabditis elegans
Exon242015   147   X: 8379524-8379670 Caenorhabditis elegans
Exon242016   203   X: 8380116-8380318 Caenorhabditis elegans
Exon242017   225   X: 8380370-8380594 Caenorhabditis elegans
Exon242018   228   X: 8380640-8380867 Caenorhabditis elegans
Exon242019   132   X: 8380925-8381056 Caenorhabditis elegans
Exon242020   128   X: 8381100-8381227 Caenorhabditis elegans
Exon242021   370   X: 8381313-8381682 Caenorhabditis elegans
Exon242024   92   X: 8381948-8382039 Caenorhabditis elegans
Exon242025   241   X: 8382096-8382336 Caenorhabditis elegans
Exon242026   314   X: 8382398-8382711 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.1.1 8378557 8382711 1

1 Sequence

Length
2701

1 Sequence Ontology Term

Identifier Name Description
transcript