WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D9.3b.1 Sequence Name  F41D9.3b.1
Length (nt)  1856   Chromosome Location  X: 8387448-8392586
Chromosome . Primary Identifier  X Chromosome Location . Start  8387448
Chromosome Location . End  8392586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006942 wrk-1 F41D9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D9.3b F41D9.3b 1335   X: 8387964-8388043

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.3b.1 8387448 8392586 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242064   596   X: 8387448-8388043 Caenorhabditis elegans
Exon242067   318   X: 8388618-8388935 Caenorhabditis elegans
Exon242073   166   X: 8389393-8389558 Caenorhabditis elegans
Exon242077   131   X: 8389612-8389742 Caenorhabditis elegans
Exon242081   24   X: 8390599-8390622 Caenorhabditis elegans
Exon242086   151   X: 8390950-8391100 Caenorhabditis elegans
Exon242091   128   X: 8391206-8391333 Caenorhabditis elegans
Exon242096   106   X: 8392118-8392223 Caenorhabditis elegans
Exon242101   147   X: 8392306-8392452 Caenorhabditis elegans
Exon242108   89   X: 8392498-8392586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.3b.1 8387448 8392586 -1

1 Sequence

Length
1856

1 Sequence Ontology Term

Identifier Name Description
transcript