WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D9.3e.1 Sequence Name  F41D9.3e.1
Length (nt)  1878   Chromosome Location  X: 8387446-8392582
Chromosome . Primary Identifier  X Chromosome Location . Start  8387446
Chromosome Location . End  8392582 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D9.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006942 wrk-1 F41D9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D9.3e F41D9.3e 1359   X: 8387964-8388043

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.3e.1 8387446 8392582 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242041   598   X: 8387446-8388043 Caenorhabditis elegans
Exon242047   318   X: 8388618-8388935 Caenorhabditis elegans
Exon242052   166   X: 8389393-8389558 Caenorhabditis elegans
Exon242056   131   X: 8389612-8389742 Caenorhabditis elegans
Exon242061   24   X: 8390599-8390622 Caenorhabditis elegans
Exon242066   151   X: 8390950-8391100 Caenorhabditis elegans
Exon242072   152   X: 8391206-8391357 Caenorhabditis elegans
Exon242076   106   X: 8392118-8392223 Caenorhabditis elegans
Exon242081   147   X: 8392306-8392452 Caenorhabditis elegans
Exon242084   85   X: 8392498-8392582 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.3e.1 8387446 8392582 -1

1 Sequence

Length
1878

1 Sequence Ontology Term

Identifier Name Description
transcript