WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D9.5.1 Sequence Name  F41D9.5.1
Length (nt)  2623   Chromosome Location  X: 8403539-8408367
Chromosome . Primary Identifier  X Chromosome Location . Start  8403539
Chromosome Location . End  8408367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018283 sulp-3 F41D9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D9.5 F41D9.5 2349   X: 8403728-8403962

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.5.1 8403539 8408367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242094   424   X: 8403539-8403962 Caenorhabditis elegans
Exon242096   287   X: 8404605-8404891 Caenorhabditis elegans
Exon242097   102   X: 8404974-8405075 Caenorhabditis elegans
Exon242098   148   X: 8405181-8405328 Caenorhabditis elegans
Exon242099   107   X: 8405372-8405478 Caenorhabditis elegans
Exon242100   288   X: 8405809-8406096 Caenorhabditis elegans
Exon242101   148   X: 8406149-8406296 Caenorhabditis elegans
Exon242102   83   X: 8406356-8406438 Caenorhabditis elegans
Exon242103   156   X: 8406488-8406643 Caenorhabditis elegans
Exon242104   165   X: 8407010-8407174 Caenorhabditis elegans
Exon242105   124   X: 8407220-8407343 Caenorhabditis elegans
Exon242106   163   X: 8407390-8407552 Caenorhabditis elegans
Exon242107   111   X: 8407611-8407721 Caenorhabditis elegans
Exon242108   205   X: 8407987-8408191 Caenorhabditis elegans
Exon242109   112   X: 8408256-8408367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.5.1 8403539 8408367 -1

1 Sequence

Length
2623

1 Sequence Ontology Term

Identifier Name Description
transcript