WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F1.8.1 Sequence Name  F08F1.8.1
Length (nt)  731   Chromosome Location  X: 8422480-8423731
Chromosome . Primary Identifier  X Chromosome Location . Start  8422480
Chromosome Location . End  8423731 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006649 tth-1 F08F1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F1.8 F08F1.8 456   X: 8422866-8422997

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.8.1 8422480 8423731 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242148   241   X: 8422480-8422720 Caenorhabditis elegans
Exon242150   144   X: 8422854-8422997 Caenorhabditis elegans
Exon242151   206   X: 8423074-8423279 Caenorhabditis elegans
Exon242153   140   X: 8423592-8423731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.8.1 8422480 8423731 -1

1 Sequence

Length
731

1 Sequence Ontology Term

Identifier Name Description
transcript